BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G03SP1|AL428955
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1740 0.0
>3x_Contig1795
Length = 38452
Score = 1740 bits (877), Expect = 0.0
Identities = 892/895 (99%), Gaps = 2/895 (0%)
Strand = Plus / Plus
Query: 1 gatcccatggctagtagattttgtatatccggcacgg-aatttatgtttgctcctgaccc 59
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 19429 gatcccatggctagtagattttgtatatccggcacgggaatttatgtttgctcctgaccc 19488
Query: 60 agaaactacacctccagcaacgcctttgtatttctttaaagtctctctggccttctttct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19489 agaaactacacctccagcaacgcctttgtatttctttaaagtctctctggccttctttct 19548
Query: 120 ttcttgtctgatctgttcatcgctctctagtagcttaactagctgactggctctattcct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19549 ttcttgtctgatctgttcatcgctctctagtagcttaactagctgactggctctattcct 19608
Query: 180 cacattgatcccttggtctcttccctgcgagtcaatgtaatggaaactttccagcatctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19609 cacattgatcccttggtctcttccctgcgagtcaatgtaatggaaactttccagcatctt 19668
Query: 240 taccaaattcaggttcgtgcgtacatcgtcaataaacctctcactaccatgcttgaccaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19669 taccaaattcaggttcgtgcgtacatcgtcaataaacctctcactaccatgcttgaccaa 19728
Query: 300 atattccaatagttgtaacgccttgtaaatctgtctccattcactggctgtcttctcagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19729 atattccaatagttgtaacgccttgtaaatctgtctccattcactggctgtcttctcagt 19788
Query: 360 gaaacgtncgaaatatcattcccaaaatctcttctctttctctataattataggtcccct 419
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19789 gaaacgt-cgaaatatcattcccaaaatctcttctctttctctataattataggtcccct 19847
Query: 420 gagcaatatgttccataagggttgaagaagcgccccatggctcattgttcgtggcctctc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19848 gagcaatatgttccataagggttgaagaagcgccccatggctcattgttcgtggcctctc 19907
Query: 480 tcactttcgcctccatttcagtatagttaaagaccacattttgagcctttctgaagtatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19908 tcactttcgcctccatttcagtatagttaaagaccacattttgagcctttctgaagtatt 19967
Query: 540 tcttagcatcataaagagagagtttcgttatcgtatcctctaatgacatgactccttata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19968 tcttagcatcataaagagagagtttcgttatcgtatcctctaatgacatgactccttata 20027
Query: 600 tgcactatcgataaagctgccgtataaataaatctccgatagaaagttagtgaactcgcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20028 tgcactatcgataaagctgccgtataaataaatctccgatagaaagttagtgaactcgcg 20087
Query: 660 tgttaacaggctgatatagagttacagtataarattattatgtgtattgtctgtttaacc 719
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 20088 tgttaacaggctgatatagagttacagtataaaattattatgtgtattgtctgtttaacc 20147
Query: 720 tcgtggctaaggtgcgattttggcactgaatttgaaatcagagatattactttaccctat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20148 tcgtggctaaggtgcgattttggcactgaatttgaaatcagagatattactttaccctat 20207
Query: 780 ttcaaaggatgaaacagaacaaaggacagaagtcaaagagaagagtcctagattacaata 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20208 ttcaaaggatgaaacagaacaaaggacagaagtcaaagagaagagtcctagattacaata 20267
Query: 840 ggcaattgaccttcggaattgttaaggcgttatattttgagctcatgaagataat 894
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20268 ggcaattgaccttcggaattgttaaggcgttatattttgagctcatgaagataat 20322
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6317
Number of Sequences: 1807
Number of extensions: 6317
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)